InterviewSolution
Saved Bookmarks
InterviewSolution
| 1. |
Why Does Rosetta Delete Some Of My Residues? |
|
Answer» ROSETTA will DELETE residues which are missing too many backbone atoms. "Missing" includes those atoms which are marked with zero occupancy in the PDB. ADD the FLAG "-ignore_zero_occupancy false" to change this behavior. If the backbone atoms are completely missing, use the loopmodel protocol to build in the residues. Rosetta will delete residues which are missing too many backbone atoms. "Missing" includes those atoms which are marked with zero occupancy in the PDB. Add the flag "-ignore_zero_occupancy false" to change this behavior. If the backbone atoms are completely missing, use the loopmodel protocol to build in the residues. |
|