The initial alignments used to produce the guide tree may be obtained by various methods. Which of the following is not one of them?(a) Fast k-tuple(b) pattern-finding approach similar(c) FASTA(d) Faster, full dynamic programming methodThe question was asked by my college professor while I was bunking the class.This intriguing question originated from Progressive Methods of Multiple Sequence Alignment in section Multiple Sequence Alignment of Bioinformatics

The initial alignments used to produce the guide tree may be obtained

1.	The initial alignments used to produce the guide tree may be obtained by various methods. Which of the following is not one of them?(a) Fast k-tuple(b) pattern-finding approach similar(c) FASTA(d) Faster, full dynamic programming methodThe question was asked by my college professor while I was bunking the class.This intriguing question originated from Progressive Methods of Multiple Sequence Alignment in section Multiple Sequence Alignment of Bioinformatics
Answer» Right option is (d) Faster, full dynamic programming method The best explanation: The methods used, might be fast k-tuple or pattern-finding approach similar to FASTA that is useful for MANY sequences and the full dynamic programming method as well. But the option d becomes incorrect as full dynamic programming method is slower as COMPARED to rest of the methods in OPTIONS.

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