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The number of possible global alignments between two sequences of length N is _____(a) \(\frac{2^N}{\sqrt{πN}}\)(b) \(\frac{2^{2N}}{\sqrt{πN}}\)(c) \(\frac{2^{(N-1)}}{\sqrt{πN}}\)(d) \(\frac{2^{2N}}{\sqrt{N}}\)I have been asked this question during an interview for a job.My doubt is from Needleman topic in chapter Multiple Sequence Alignment of Bioinformatics

Answer»

Right choice is (b) \(\frac{2^{2N}}{\sqrt{πN}}\)

For EXPLANATION I would SAY: By the total number of permutations and combinations option b gives the accurate number of possible GLOBAL ALIGNMENTS between two sequences of length N. For two sequences of 250 residues this is 10^149.



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